AlignedPatch Struct Reference

holds the result of a local sequence alignment More...

#include <local_align.hh>

Public Member Functions
bool	operator== (const AlignedPatch &rhs) const
bool	operator!= (const AlignedPatch &rhs) const
Data Fields
int	offset_a
int	offset_b
AlignmentHandle	alignment

---

Detailed Description

holds the result of a local sequence alignment

Definition at line 34 of file local_align.hh.

---

Member Function Documentation

bool operator!=

(

const AlignedPatch &

rhs

)

const [inline]

Definition at line 45 of file local_align.hh.

bool operator==

(

const AlignedPatch &

rhs

)

const [inline]

Definition at line 41 of file local_align.hh.

---

Field Documentation

AlignmentHandle alignment

the aligned patch

Definition at line 40 of file local_align.hh.

int offset_a

offset of aligned patch relative to the start of the first sequence

Definition at line 36 of file local_align.hh.

int offset_b

offset of aligned patch relative to the start of the first sequence

Definition at line 38 of file local_align.hh.

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The documentation for this struct was generated from the following file:

• stage/include/ost/seq/alg/local_align.hh